Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --MKLNFLYANMQKDIDSVEKELKKALSGAAADTTSAAALHLLEAGGKRIRPMFVCLSARLAANADFNAVKNASVAIELIHMASIVHDDVVDDADLRRGRETIKSKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQSVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDFVGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQITEETPAEEIAVLVEEVKKTGA-KQAEDVATTYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY |
| 3OYR Chain:A ((20-343)) | KSGSVDRLVRLAEADMAGVNRLITDRMQSDVA-IIPALAEHLIAAGGKRLRPLMTVAAARLA-GADNDHFQKLAAAVEFIHTATLLHDDVVVAAHL---------IWGGAQSVLVGDFLFARAFELMVETNSMKALEILARASRVIAEGEVLQLMRSHDLNLSQAVYLEIIQAKTAELFAAASEAGAVSAGVDVAKSEALRDYGLNLGLAFQLADDALDYA-------------------TLPLLLAIARSGPREAEFWERAIGTEADFRRARELIIGSGALDATLDLAADYADKAKAALAMFPANDWREALEELADFAVSR-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3OYR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -185657 for 2432 contacts (-76.3/contact) +
2D Compatibility (PS) -31033 + (NN) -15769 + (LL) 1020
1D Compatibility (HY) -12000 + (ID) 4500
Total energy: -247939.0 ( -101.95 by residue)
QMean score : 0.542
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