Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LDKTKRKMIYETFMLILILLSLALLPYRNNFTFILNWIIWVIFTLDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVPIYSFFRSNGLNRFLMIFVLLV---IIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIVPVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKPTNSSTQRANKITQLISETPDLTKEEIAVVEQFLTLRKKELADENTKSDSE
3FB5 Chain:C ((6-94))
----------------------------------------------------------------------------------------------------------WRAAGAATVLLVIVLLAGSYLAVLAERGAPGAQLITYPRALWWSVETATTVGYGDLYPVTLWGRCVAVVVMVAGITSFGLVTAALATWF-------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3FB5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73799 for 573 contacts (-128.8/contact) +
2D Compatibility (PS) -8743 + (NN) -1478 + (LL) 14476
1D Compatibility (HY) -10000 + (ID) 1650
Total energy: -81194.0 ( -141.70 by residue)
QMean score : 0.160
(partial model without unconserved sides chains):
PDB file :
Tito_3FB5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3FB5-query.scw
PDB file :
Tito_Scwrl_3FB5.pdb
: