Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MKKLWKKGLVAFLALTLIFQLIPGFASAA-DSRLKDGG----EYQVQVN---FYKDNT--GKTTKESSEADKYIDHTATIKVENGQPYMYLTITNSTWWQTMAVSKNGTRPEKPAQADVYQDRYEDVQTVS--TDAAKDTRVEKFKLSSLDDV-IFSYMHI----KVDAISYDHWYQVDLTI--------DPSTFKVISEPAVTTPVTLSD--GIYTIPFVAKKANDDSNSSMQNYFNNPAWLKVKNGKKMVAMTVNDNKTVTALKTTLAGTLQDVKVVSEDKDANTRIVEFEVEDLNQP---LAAHVNYEAPFNGSVYKGQAD----FRYVFD--------TAKATAASSYPGSDETPPVVNPGETNPPVTKPDPGTTNPPVTTPPTTPSKPAVVDPKNLLNNHTYSIDFDVFKDGTTETSMMESYVMKPALIKVENNQPYVYLTLTNSSWIKTFQYKVNGVWKDMEVVS-GDINKNTRTVKYP-----VKDGTANTDVKTHVLIEDMPGFSYDHEYTVQVKLNAATIKDITGKDVTLKEPVKKDILNTGNVASNNNA-----------GPKLAKPDF--DDTNSVQKTASKTEKNAKT-------NDSSSMVWYITLF--------------GASFLYLAYRLKRK---RLS----- |
| 4IGL Chain:B ((4-690)) | QLFSKTPSVTVFDNRGLSVRDIAYRRHPDTPKVTEECITYHQFDFRGFLAQSLDPRLNHKEVTNFSYLTDLNGNIIYTQSVDAGNTLVLNDTEGRSVIAMTNISRENGKDDLSLAVTRTFQYENAPLP--GRPLSVTEQVNGENARITEHFVYAGNTPQEKNLNLAGQCVSYYDAAGLIQTDSVSLTGKPLSVSRKLLKNLDDTNILADWQGNDTSAWNSLLATEIYTTVTRTDAAGAVLTTIDAVGNQQRVAFDIAG-QLSASWLTLKGGQEQVIIKVLTYSAAGQKLREEGGNGVVTTYTYEAETQRLIGIKTERPNGHAAGAKVLQDLRYEYDPVGNVLSITNDAVPENAYRYDSLYQLVSASGREVAGAGQQGSDLPSPLV-------PLPSDSSVYTNYTRTYTYDSAGNLMRIRHSAPATNNNYTLNITVSERSNR--GVMSSLTENPADVDALFTASGSQKCLQQG---QSLIWTPRGELRTVLLVARGETADDSESYRYDGSSQRILKISSQQTSARVQRALYLPGLEW-RTMTGAENLQVICIGEAQVRVLHWESGKPDGIINDQIRWSYDNLTCSSGLEVDGDGLVISMEEYYPYGGTAVWAARSHIETAYKTVRYSGKERDATGLYYYGFRYYQPWAGRWLSADPAGTVDGLNLYRMVRNNPLRLTDPDGM |
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General information:
TITO was launched using:
| RESULT:
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Template: 4IGL.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 126843 for 3875 contacts (32.7/contact) +
2D Compatibility (PS) -56498 + (NN) 10965 + (LL) 32
1D Compatibility (HY) -6800 + (ID) 4900
Total energy: 69642.0 ( 17.97 by residue)
QMean score : 0.006
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