Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKVIFSGIQPSGQLTLGNYIGALKQFGQFQD-EYECFYCIVDEHAITVP-QDRLKLREQTRSLAALYLAVGLDPEKSTLFIQSEVAAHAQAAWILQCNVYIGELERMTQFKDKSAGKAGVSAGLLTYPPLMAADILLYQTDLVPVGEDQKQHIELTRDLAERFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSDANLKNAIFLLDPPATIRKKIKSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITG--ETIASIEEKYV--GKGYGDFKTDLAELVVSELEPIQERYYAYLKSEE-LDTILDAGAEKAARVANKTLKKMENGVGLGRKRRK |
| 2G36 Chain:A ((14-340)) | ---RILSGMRPTGKLHIGHLVGALENWVKLQEEGNECFYFVADWHALTTHYDDVSKLKEYTRDLVRGFLACGIDPEKSVIFVQSGVKEHAELALLFSMIVSVSRLERVPTYKEI----DLSTAGFLIYPVLQAADILIYKAEGVPVGEDQVYHIELTREIARRFNYLYDEVFPEPEAILSR-VPKLPGT-DG-RKMSKSYG---NIINLEISEKELEQTILRMMTDPARVRRSDP-GNPENCPVWKYHQAFDISEEESKWVWEGCTTASIGCVDCKKLLLKNMKRKLAPIWENFRKIDEDPHYVDDVIMEGTKKAREVAAKTMEEVRRAMNLMF---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2G36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140217 for 2435 contacts (-57.6/contact) +
2D Compatibility (PS) -33803 + (NN) -11787 + (LL) 1228
1D Compatibility (HY) -22400 + (ID) 5500
Total energy: -212479.0 ( -87.26 by residue)
QMean score : 0.588
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