Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LKVDSLSKKID-GKLLLDKITFEVKPGEIIGIVGRNGVGKTTLFRTIMGFYIPDAGDVYLD-EPLSK--NHQLKQKLFMLQDNLNCWDGYKIPTIKKFYQKTYPLFDGDKFDNLMKQVNLAKD-------------VKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQKKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVKIQIAFENKKIPHFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTLEDLFIYHLEEQGGEKL |
| 3NH6 Chain:A ((54-279)) | IEFENVHFSYADGRETLQDVSFTVMPGQTLALVGPSGAGKSTILRLLFRFYDISSGCIRIDGQDISQVTQASLRSHIGVVPQDTVLFN-DTIADNIRYGRVTAG---NDEVEAAAQAAGIHDAIMAFPEGYRTQVGERGLKLSGGEKQRVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVC--ANRTTIVVAHRLSTVV-NADQILVIKDGCIVERGRHEALLSRG---------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3NH6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -128627 for 1578 contacts (-81.5/contact) +
2D Compatibility (PS) -22073 + (NN) -1771 + (LL) 6772
1D Compatibility (HY) -6800 + (ID) 2300
Total energy: -154799.0 ( -98.10 by residue)
QMean score : 0.565
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