Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGK------NPL-LVGVLKGSVPFMAELLKHI---DTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVGVLKEEIYSK
1I13 Chain:A ((9-191))
------EKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGLTSSGQVRMLLDTRHSIEGHHVLIVEDIVATALTLNYLYHMYFTRRPASLKTVVLLDKREGRRVPFSADYVVANIPNAFVIGYGLDYDDTYRELRDIVVLRPEVYA-
General information:
TITO was launched using:
RESULT:
Template:
1I13.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -124847 for 1319 contacts (-94.7/contact) +
2D Compatibility (PS) -19152 + (NN) -7089 + (LL) 600
1D Compatibility (HY) -20800 + (ID) 4000
Total energy: -175288.0 ( -132.89 by residue)
QMean score : 0.520
(partial model without unconserved sides chains):
PDB file :
Tito_1I13.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1I13-query.scw
PDB file :
Tito_Scwrl_1I13.pdb
: