Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVLEIKNLHVSIED-KEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEV-DERARLGLFLAMQYPS-EVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMR-GEGFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV |
| 3GFO Chain:A ((5-233)) | DYILKVEELNYNYSDGTHALKGINMNIKRGEVTAILGGNGVGKSTLFQNFNG--ILKPSSGRILFDNKPIDYSRKGIMKLRESIGIVFQDPDNQLFSASVYQDVSFGAVNMKL-----PEDEIRKRVDNALKRTGIEH-L-KDKPTHCLSFGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEIMKLLVEMQKELGITIIIATHDIDIVP-LYCDNVFVMKEGRVILQGNPKEVFAEKEVIRKVNLRLPRIGHLMEI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GFO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101752 for 1802 contacts (-56.5/contact) +
2D Compatibility (PS) -24339 + (NN) -7753 + (LL) 160
1D Compatibility (HY) -12000 + (ID) 3250
Total energy: -148934.0 ( -82.65 by residue)
QMean score : 0.493
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