Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKQFAVDFIEASREEASAILEFLNTVTEETDFILHTVSNQLSLSEMETFIENTLMTKNCICLIAKLKNKVIGLITIISQSDIEIEHVGDLFIAVQKDYWGYGIGHILMEEAIEWASDNDITRRLELSVQGRNERAIHLYQKFGFEIDGLQTRGIKRENGEFLDIYRMSKLID
2VI7 Chain:A ((7-168))
-----TIRLERYSERHVEGLTALYNDPAVARQVLQM-P--YQSVEQRRKRLHDS-DDDRLLILVALHQGDVIGSASLEQHPRIRRSHSGSIGMGVAVAWQGKGVGSRLLGELLDIADNWMNLRRVELTVYTDNAPALALYRKFGFETEGEMRDYAV-RDGRFVDVYSMARLRR
General information:
TITO was launched using:
RESULT:
Template:
2VI7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -96941 for 1201 contacts (-80.7/contact) +
2D Compatibility (PS) -17395 + (NN) -3006 + (LL) 716
1D Compatibility (HY) -7200 + (ID) 1900
Total energy: -125726.0 ( -104.68 by residue)
QMean score : 0.450
(partial model without unconserved sides chains):
PDB file :
Tito_2VI7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VI7-query.scw
PDB file :
Tito_Scwrl_2VI7.pdb
: