Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKIIYLGLACVSILTLSGCESIERSLKGDRYVDQKLAENSSKEATEQLNKKTKQALKADKKAFPQLDKAVAKNEAQVLIKTSKGDINIKLFPKYAPLAVENF--LTHAKEGY-YNGLSFHRVIKDFMIQSGD-PNGDGTGGKSIWNSKDKKKDSGNGFVNEISPYLYNIRGSLAMANAGADTNGSQFFINQSQQDHSKQLSDKKVPKVIIKAYSEGGNPSLDGGYTVFGQVISGMETVDKIASVEVTKSDQPKEKITITSIKVIKDYKFK |
3R54 Chain:A ((19-160)) | ------------------------------------------------------------------------------------GRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTGGKSIYGSRFPDE---NFTLKHVGP------GVLSMANAGPNTNGSQFFICTIKTDW------------------------LDGKHVVFGHVIEGMDVVKKIESFG-SKSGRTSKKIVITDCGQLS----- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3R54.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -20328 for 1030 contacts (-19.7/contact) +
2D Compatibility (PS) -14811 + (NN) -7852 + (LL) 8668
1D Compatibility (HY) -11200 + (ID) 3350
Total energy: -48873.0 ( -47.45 by residue)
QMean score : 0.489
|
|
|