Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------MTDNSNI-----RVVVGMSGGVDSSVTALLLKEQGYDVIGVFMKNWDDTDEFGVCTATEDYKDVAAVADQIGIPYYSVNFEKEYWDRVFEYFLAEYRAGRTPNPDVMCNKEIKFKAFLDYAMTLGADYVATGHYAQVTRDENGIVHMLRGADNNKDQTYFLSQLSQEQLQKTLFPLGHLQKPEVRRIAEEAGLATAKKKDSTGICFIGEKNFKDFLGQYLPAQPGRMMTVDGRDMGEHAGLMYYTIGQRGGLGIGGQHGGDNKPWFVVGKDLSKNILYVGQGFYHDSLMSTSLTASEIHFTRDMPNEFKLECTAKFRYRQPDSKVTVYVKGNQARVVFDDLQRAITPGQAVVFYNEQECLGGGMIDQAYRDDKICQYI |
| 3VRH Chain:A ((1-309)) | MKCKFCSREAYIKIHYPKMYLCEEHFKEYFERKVSRTIERYKLLTKDERILVAVSGGKDSAVTAYVLKKLGYNIECLHINLGISGY------SEKSEEYAKKQCKLIGAPLHIVRIKEILGYGIGEV--------KTRRPPCSYCGLTKRYIMNKFAYDNGFDAIATGHNLDDEASFLLNNILHWNTEYLAKGGPILP--QQGKFIKKVKPLYEVTEREVVAYALAVGLEYIVEE-----CPYTTLDMKGVLNELEEKRPG----------------------------------------------------------------------TKFNFVRGYLKKKKLFEPKECKICRMPS--------SGDICAFCKFWGLKKEINFKVSSTDEEPFG----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3VRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62369 for 2026 contacts (-30.8/contact) +
2D Compatibility (PS) -27041 + (NN) -4211 + (LL) 5720
1D Compatibility (HY) -7200 + (ID) 2650
Total energy: -97751.0 ( -48.25 by residue)
QMean score : 0.358
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