Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAISWKEMNELQPRVMKLLYNSIEKDRLSHAYLFEGKKGTGKLDAALLLAKSFFCLEGG-AEPCESCRNCKRIESGNHPDLHLVQPDGLSIKKAQIQALQEEFSKTGLESHKKLYIISHADQMTANAANSLLKFLEEPNKDTMAVLITEQPQRLLDTIISRCQTLPFQPLQPKAIEDRLIE----QD--VSPHMARL---LANMTNNVAEAVELSRN-DEFAE---SRAKVIK------------LYEVLHQRKGH-AFFFIQDQWMPFFKEKTHQEMGLDMLLLIYRDVLSIQIGNEDKL-IYQDLFQSIKQHALQSTQQSVTNQILAVLEAKKRLHSNVNVQGLMEHLVLMLQEG |
| 1JR3 Chain:A ((12-358)) | -PQTFADVV-GQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDLIEIDAA-SRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSRHSFNALLKTLEEPPEHVKFLLATTDPQKLPVTILSRCLQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAA--EGSLRDALSLTDQAIASGDGQVSTQAVSAMLGTLDDDQALSLVEAMVE-ANGERVMALINEAA---ARGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAIELRMRELARTIPPTDIQLYYQTLLIGRKELPYAPDRRMGVEMTLLRALA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JR3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -134349 for 2354 contacts (-57.1/contact) +
2D Compatibility (PS) -35001 + (NN) -21244 + (LL) 320
1D Compatibility (HY) -11600 + (ID) 3850
Total energy: -205724.0 ( -87.39 by residue)
QMean score : 0.492
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