Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
5B8F Chain:C ((8-162))
-MRIGHGYDVHRFGEGDFITLGGVRIPHKHGLVAHSDGDVLLHALSDALLGAAALGDIGKHFPDTDPRFKGADSRALLRHVVAIVAEKGWKVGNVDATIVAQAPKMAPHIETMRGLIAEDLGVAVDQVNVKATTTERLGFTGREEGIAVHAVALLM--
General information:
TITO was launched using:
RESULT:
Template:
5B8F.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116198 for 1303 contacts (-89.2/contact) +
2D Compatibility (PS) -17012 + (NN) -10437 + (LL) 100
1D Compatibility (HY) -13600 + (ID) 4750
Total energy: -161897.0 ( -124.25 by residue)
QMean score : 0.593
(partial model without unconserved sides chains):
PDB file :
Tito_5B8F.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-5B8F-query.scw
PDB file :
Tito_Scwrl_5B8F.pdb
: