Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSNTWKIYILAIVSFLVGTSEYIISGILDQIAHTLGITLAAAGQLITIFSLVYALSTPVLMALTASMDRRKLMMYALGLFVFGNVLAFVL---PGYGWFIAARIIMAMGAGVVVVTALTIAAKIASEGKQGSAIATVVMGFTASLIIGVPLGRMI--AVALGWKSVFGAIALLGLIAMVVIFFTLPYTEGD--------KPVP------------------------------LLQQLALFKKRKVAMGLSITFFWLG-----GYSVAYTYLSPYLLNISGINGKLLSGVLLIFGIASLVGSKFGGYSTDKWGVPFTLVGGMTLHIVTLILLSLV----THS-Y---IGVLVILILWSFAAWSTGPTQQFHLATIEP-EMSGVLLSMNQSMMQFAMAVGAGIGGVFVENVSLASITWVGALGVMIAIIASLLIFNSQPKQALKDINQ
4PYP Chain:A ((63-455))---------------------------------------TLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMMNLLAFVSAVLMGFSKLGKSFEMLILGRFIIGVYCGLTTGFVPMYVGEVSPTALRGALGTLHQLGIVVGILIAQVFGLDSIMGNKDLWPLLLSIIFIPALLQCIVL-PFCPESPRFLLINRNEENRAKSVLKKLRGTADVTHDLQEMKEESRQMMREKKVTILELFRSPAYRQPILIAVVLQLSQQLSGINAVFYYSTSIFEK-AGVQ--QPVYATIGSGIVNTAFTVVSLFVVQRAGRRTLHLIGLAGMAGCAILMTIALALLEQLPWMSYLSIVAIFGFVAFFEVGPGPIPWFIVAELFSQGPRPAAIAVAGFSNWTSNFIVGMCFQYVEQLCGP-YVFIIFTVLLVLFFIFTYFKVPET----------


General information:
TITO was launched using:
RESULT:

Template: 4PYP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -337114 for 2673 contacts (-126.1/contact) +
2D Compatibility (PS) -34292 + (NN) -10097 + (LL) 4588
1D Compatibility (HY) -17200 + (ID) 2100
Total energy: -396215.0 ( -148.23 by residue)
QMean score : 0.313

(partial model without unconserved sides chains):
PDB file : Tito_4PYP.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4PYP-query.scw
PDB file : Tito_Scwrl_4PYP.pdb: