Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSSPIQEQVQKEKRSNIPSISEMKVIPVAGHDSMLLNLSGAHSPFFTRNIV-ILTDSSGNQGVGEVPG-GEHIRRTLELSEPLVVGKSIGAYQAILQTVRKQFGDQDRGGRGNQTFDLRTTVHA---VTALEAALLDLLGKFLQEPVAALLGEGKQRDEVKMLGYLFYIGDRNRTTLPYQSDEQSDCAWFRLRHEEALTPEAIVRLAESAQERYGFQDFKLKGGVLRGEEEIEAVTALSKRFPEARITLDPNGAWSLEEAIALCKGKQDVLAYAEDPCGDENGYSAREVMAEFRRATGLPTATNMIATDWREMGHAIQLHAVDIPLADPHFW-TMQGSVRVAQMCHDWGLTWGSHSNNHFDISLAMFTHVAAAAPGRITAIDTHWIWQ--DGQRLTKQPFEISSGCVKVPDKPGLGVDIDMEQVEKAHEIYRKMNLGARNDAIPMQFLISNWEFDRKRPCLVR
3VA8 Chain:A ((29-443))-------------------IKEIVITPVAFHDMPLLNSVGVHEPFALRSIIEIITEDS--YGLGESYGDSAHLDR-LQKAADKIKGLSVYSTNVIYQRCVESLRNDTN--GDGMGGMVVTASVADKVFSPFEVACLDLQGKLAGISVSDLLG-GRVRDSVQYSAYLFYKWGGH----PGDEDDE---------YGPALDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRLDPNAAWTVETSKWVAKELEGIVEYLEDPAGEIEG------MAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKSQTLASICATWGLRLSMHSNSHLGISLAAMTHLASATPNLDYACDTHWPWKRRDEDVVIEGALKWKDGGVIVPSGPGLGVELDRERLAKLHQQYVDCGLKKRDDTTYMKRFKP--EFSEKIP----


General information:
TITO was launched using:
RESULT:

Template: 3VA8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2457 -203409 -82.79 -502.24
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.76

3D Compatibility (PKB) : -82.79
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.508

(partial model without unconserved sides chains):
PDB file : Tito_3VA8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3VA8-query.scw
PDB file : Tito_Scwrl_3VA8.pdb: