Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKFAVIVLPGSNC--------DIDMYHAVKDELGHEVEYVWHEET------SLDGFDGVLIPGGFSYGDYLRCGAIARFANIMPAVK--QAAAEGKPVLGVCNGFQILQELGLLPGAMRRNKDLKFICRP-VELIVQN--DETLFTASYEK-------GESITIPVAHGEGNFYCDDETLATLKENNQIAFTYGSNINGSVSDIAGVVNEKGNVLGMMPHPERAVDELLGS------A---DGLKLFQSIVKNWRETHVTTA
4L8F Chain:C ((31-278))PIIGVLAQDVFDPKPDRNSYIAASYVKFLESA-GARVVPVMINKSEDEYSRLFKSINGVLFPGGGVSLESSGYS--KAAGIFYRLALEANSNGDYFPVWGTALGFELLTLLT---SGELLLSHT-NTSGIALPLDFTEDVKGSRLFKEFPEELMKSLATEPLTEN-SHQWSITTENFTANKKL-KKFYRVLST--NTDGYNKFVSTMEAYDFPIYATQWHPEKNAFEWTRPYIPHTPSAIKTTFYMANFFVNEARKNLH---


General information:
TITO was launched using:
RESULT:

Template: 4L8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1193 -93373 -78.27 -438.37
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain C : 0.65

3D Compatibility (PKB) : -78.27
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.346

(partial model without unconserved sides chains):
PDB file : Tito_4L8F.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4L8F-query.scw
PDB file : Tito_Scwrl_4L8F.pdb: