Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDVIKISPRGYCYGVVDAMVIAKNASLDKSLPRPIYILGMIVHNKHVTDAFEEEGIFTLDGSNRLDILKQVDKGTVIFTAHGVSPEVRRIAEEKGLVAIDATCPDVTKTHNLILEMKEKGYHVIYIGKKGHPEPEGAVG--VAPE-IVHLVETEEDVKNLDIQS-EKLIVTNQTTMSQWDVHDIMELVKEKYPHV--EYHQEICLATQVRQEAVSEQAKKADLTIVVGDPKSNNSNRLAQVSEEIAGTKAYRIGDLSELKLEWLKGVNTVAVTAGASTPTPITKEVIRFLEQFDHEDPSTWTTEHNIPLKKILPKVKAKN
3KE9 Chain:B ((11-295))MQILLANPRGFCAGVDRAISIVENAL--AIYGAPIYVRHEVVHNRYVVDSLRERGAIFIE-----QISEVPDGAILIFSAHGVSQAVRNEAKSRDLTVFDATCPLVTKVHMEVARASRRGEESILIGHAGHPEVEGTMGQYSNPEGGMYLVESPDDVWKLTVKNEEKLSFMTQTTLSVDDTSDVIDALRKRFPKIVGPRKDDICYATTNRQEAVRALAEQAEVVLVVGSKNSSNSNRLAELAQRM-GKRAFLIDDAKDIQEEWVKEVKCVGVTAGASAPDILVQNVVARLQQL---------------------------


General information:
TITO was launched using:
RESULT:

Template: 3KE9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1582 -16578 -10.48 -59.42
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -10.48
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.608

(partial model without unconserved sides chains):
PDB file : Tito_3KE9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KE9-query.scw
PDB file : Tito_Scwrl_3KE9.pdb: