Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAREISRQTFLRGAAGALAAGAVFGSVRATADPAASGWEALSSALGGKVLQPD--DGPQFATA--KQVFNTNYN---GYTPAVIVTPTSQLDVQKAMAFAAANNLKVAPRGGGHSYVGASTA----NGAMVLDLRQLPGDINYDATTGRVTVTPATGLYAMHQVLAAA--GRGIPTGTCPTVGVAGHALGGGLGANSRHAGLLCDQLTSASVVLPSGQAVTASATDHPDLFWALRGGGGGNFGVTTSLTFATFPSGDL-DVVNLNFPP-QSFAQVLVGWQNWLRTADRGSWALADATVDP-L--GTHCRIL--ATCPAGSGGSVAAAIVSAV-GTQPTGTENHTFNYLDLVRYLAVGN----LN-------PSPLGYVGGSDVFT-TITPATAQGIASAVDAFPRGAGRMLAIMHALDGALATVSPGATAFPWRRQ-SALVQWYVETSG--S-PSEATSWLNTAHQAVRAY----SVGGYVNYLEVN-----------QPPARYFGPNLSRLSAVRQKYDPSRVMFSGLNF |
| 4UD8 Chain:A ((52-526)) | -------------------------------------------------FSPDQNA-TLFKEELESTAQNLRYLTPSNPKPVFIFEPLYETHVQAAVVCAKKLQLHLRLRSGGHDYEGLSFVAEDETPFVIVDLSKLRQ-VDVDLDSNSAWAHAGATIGEVYYRIQEKSQTHGFPAGLCSSLGIGGHLVGGAYGSMMRKFGLGADNVLDARIVDANGQILDRAA-MGEDVFWAIRGGGGGSFGVILAWKIKLVPVPATVTVFTVTKTLEQDGTKVLYKWEQIADKLDDDLFIRVIISPASKGNRTISMSYQAQFLGDS---NRLLQVMQKSFPELGLTKKDCTEMSWIKSVMYIAGFPNSAAPEALLAGKSLFKNHFKAKSDFVKEPIPVEGLEGLWERFLE---E-DSPLTIWNPYGGMMSRISESEIPFPHRNGTLFKIQWLSTWQDGKVSEERHMKWIREMYSYMEQYVSKNPRQAYVNYRDLDLGTNEGETDAREWGAKYYKGNFERLVKIKGEFDPDNFFRHEQS- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -212611 for 3581 contacts (-59.4/contact) +
2D Compatibility (PS) -46022 + (NN) -16072 + (LL) 3120
1D Compatibility (HY) -23600 + (ID) 4650
Total energy: -299835.0 ( -83.73 by residue)
QMean score : 0.460
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