Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAQQTQVTEEQARALAEESRESGWDKPSFAKELFLGRFPLGLIHPFPKPSDAEEARTEAFLVKLREFLDTVDGSVIER--AAQIPDEYVKG----------LAELGCFGLKIPSEYGGLNMSQVAYNRVLMMVTTVHSSLGALLSAHQSIGVPEPLKLAGTAEQKRRFLPRCAAGA-ISAFLLTEPDVGSDPARMASTATPIDDGQAYELEGVKLWTTNGVVADLLVVMARVPRSEGHRGGISAFVVEADSPGITVERRNKFMGLRGIENGVTRLHRVRVPKDNLIGREGDGLKIALTTLNAGRLSLPAIATGVAKQALKIAREWSVERVQWGKPVGQHEAVASKISFIAATNYALDAVVELSSQMADEGRNDIRIEAALAKLWSSEMACLVGDELLQIRGGRGYETAESLAARGERAVPVEQMVRDLRINRIFEGSSEIMRLLIAREAVDAHLTAAGDLANPKADLRQKAAAAAGASGFYAKWLPKLVFGEGQLPTTYREFGALATHLRFVERSSRKLARNTFYGMARWQASLEKKQGFLGRIVDIGAELFAISAACVRAEAQRTADPVEGEQAYELAEAFCQQATLRVEALFDALWSNTDSIDVRLANDVLEGRYTWLEQGILDQSEGTGPWIASWEPGPSTEANLARRFLTVSPSSEAKL |
| 3SF6 Chain:A ((35-305)) | ----------------------------------------------------------------REIRDTVR-SVVQRRIKPHIASWYEDGELPARELAVELGELGLLGMHLKG-YGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAM-YAIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRAT--RSGDDWILTGTKMWITNGSVADVAVVWARTDE------GIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLP-DSARLPGATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQKLA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127866 for 2103 contacts (-60.8/contact) +
2D Compatibility (PS) -27601 + (NN) -8430 + (LL) 29236
1D Compatibility (HY) -14800 + (ID) 4850
Total energy: -154311.0 ( -73.38 by residue)
QMean score : 0.451
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