Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEGFAGKVAVVTGAGSGIGQALAIELARSGAKVAISDVDTDGLADTEHRLKAISTPV----KTDRLDVTEREAFLAYADAVNEHFGTVNQIYNNAGIAFTGDIEVSQFKDIE--RVMDVDFWGVVNGTKAFLPHLIASGDGHVINISSVFGLFSAPGQAAYNSAKFAVRGFTEALRQEMALAGHPVKVTTVHPGGVKTAIARNATAAEGLDQAELAETFDKRVAHLSPQRAAQIILTGVAKNKARVLVGVDAKVLDLVVRLTGSGYQRIFPIITGRLIPRPR |
3RRO Chain:B ((10-197)) | ---LEGKVALVTGASRGIGKAIAELLAERGAKVI-------GTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDILVNNAGI--TRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRGMMKKRQGRIINVGSVVGTMGNAGQANYAAAKAGVIGFTKSMAREVASRG--VTVNTVAPGFIETDMTK-------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3RRO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -68881 for 1470 contacts (-46.9/contact) +
2D Compatibility (PS) -19800 + (NN) -6240 + (LL) 6836
1D Compatibility (HY) -14400 + (ID) 3700
Total energy: -106185.0 ( -72.23 by residue)
QMean score : 0.432
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