Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRRKVRRLTLAVSALVALFPAVAGCSDSGDNKPGATIPSTPANAEGRHGPFFPQCGGVSDQTVTELTRVTGLVNTAKNSV-GCQWLAGGGILGPHFSFSWYRGSP--IGRERKTEELS-RASVEDINIDGHSGFIAIGNEPS--LGDSLCEVGIQFSDDFIEWSVSFSQKPFPLPCDIAKELTRQSIANSK-- |
| 2VT3 Chain:A ((11-209)) | --ATAKRLPLYYRFLKNLHASGKQRVSSAELSDAVKVDSATIRRDFSY------FGALGYNVDYLLSFFRKTLDQDDVILIGVGNLGTAFLHYNTKISMAFDINESKIGTEVGGVPVYNLDDLEQHVKDESVAILTVPAVAAQSITDRLVALGIKGILNFTPARLNVPEHIRIHHIDLAVELQSLVYFLKHYS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2VT3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -7649 for 1182 contacts (-6.5/contact) +
2D Compatibility (PS) -18174 + (NN) -433 + (LL) 240
1D Compatibility (HY) -6000 + (ID) 1250
Total energy: -33266.0 ( -28.14 by residue)
QMean score : 0.120
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