Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSDPLHVTFVCTGNICRSPMAEKMFAQQLRHRGLGDAVRVTSAGTGNWHVGSCADERAAGVLRAHGYPT-DHRAAQVGTEHL-AADLLVALDRNHARLLRQL-GVE-AARVRMLRSFDPRSGTHALDVEDPYYGDHSDFEEVFAVIESALPGLHDWVDERLARNGPS
4ETM Chain:A ((16-171))-GSMISVLFVCLGNICRSPMAEAIFRDLAAKKGLEGKIKADSAGIGGWHIGNPPHEGTQEILRREGISFDGMLARQVSEQDLDDFDYIIAMDAENIGSLRSMAGFKNTSHIKRLLDYVEDSD--LADVPDPYYT--GNFEEVCQLIKTGCEQLLASIQKEK------


General information:
TITO was launched using:
RESULT:

Template: 4ETM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -114344 for 1271 contacts (-90.0/contact) +
2D Compatibility (PS) -16855 + (NN) -11001 + (LL) 96
1D Compatibility (HY) -12800 + (ID) 2600
Total energy: -157504.0 ( -123.92 by residue)
QMean score : 0.515

(partial model without unconserved sides chains):
PDB file : Tito_4ETM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ETM-query.scw
PDB file : Tito_Scwrl_4ETM.pdb: