Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSVWLRAGALVAAVMLSLSGCGGFHAGAPSTAGPCEIVPNGTPAPKTPPATVPSSRNLATNPEIATGYRRDMTVVRTAHYAAATANPLATQVACRVLRDGGTAADAVVAAQAVLGLVEPQSSGIGGGGYLVYFDARTGSVQAYDGREVAPAAATENYLRWVSDVDRSAPRPNARASGRSIGVPGILRMLEMVHNEHGRTPWRDLFGPAVTLADGGFDISARMGAAISDAAPQLRDDPEARKYFLNPDGSPKPAGTRLTNPAYSKTLSAIASAGANAFYSGDIAHDIVAAASDTSNGRTPGLLTIEDLAGYLAKRRQPLCTTYRGREICGMPSSGGVAVAATLGILEHFPMSDYAPSKVDLNGGRPTVMGVHLIAEAERLAYADRDQYIADVDFVRLPGGSLTTLVDPGYLAARAALISPQHSMGSARPGDFGAPTAVAPPVPEHGTSHLSVVDSYGNAATLTTTVESSFGSYHLVDGFILNNQLSDFSAEPHATDGSPVANRVEPGKRPRSSMAPTLVFDHSSAGRGALYAVLGSPGGSMIIQFVVKTLVAMLDWGLNPQQAVSLVDFGAANSPHTNLGGE-NPEINTSDDGDHDPLVQGLRALGHRVNL---AEQSSGLSAITRS-EA-GWAGGADPRREGAVMGDDA |
| 3G9K Chain:S ((1-175)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TTHFVIIDRDGTVVSSTNTLSNFFGTGKYTAGFFLNNQLQN------------------PGKRSRTFMAPTVLKK-----DGE-TIGIGSPGGNRIPQILTPILDKYTHGKGSLQDIINEYRFT------FEKN-TAYTEI-----QLSSEVKNELSRKGLNVKKKVSPAFFGGVQALIKDERDNVITGAGDGRRNGTWKS--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G9K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -22435 for 1094 contacts (-20.5/contact) +
2D Compatibility (PS) -16818 + (NN) -6656 + (LL) 22172
1D Compatibility (HY) -4000 + (ID) 2350
Total energy: -30087.0 ( -27.50 by residue)
QMean score : 0.195
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