Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MANASETNVGPMAPRVCVVGSVNMDLTFVVDALPRPGETVLAASLTRTPGGKGANQAVAAARAGAQVQFSGAFGDDPAAAQLRAHLRANAVGLDRTVTVPGPSGTAIIVVDASAENTVLVAPGANAHLTPVP-S----AVANCDVLLTQLEIPVATALAAARAAQSADAVVMVNASPAGQDRSSLQDLAAIADVVIANEHEANDWPS-PPTHFVITLGVRGARYVGADGVFEVPAPTVTPVDTAGAGDVFAGVLAAN-WPRNPGSPAER-LRALRRACAAGALATLVSGVGDCAPAAAAIDAALRANRHNGS |
| 3IKH Chain:A ((2-287)) | ------------SLRVYVTGNITVDETWSIPDIPKKGASIHGVKVSQDIGGKGANQAIILSRCGIETRLIAATGNDSNGAWIRQQIKNEPLMLLPDGHFNQHSDTSIILNSADGDNAIITTTAAADTFSLDEMIPHMADAVAGDILLQQGNFSLDKTRALFQYARSRGMTTVFNPSPVN---PDFCHLWPLIDIAVVNESEAELLQPYGVKTLVITQGAAGAWLVQEGQRQFCPAVPAEALDTTGAGDTFLAVMLASALLR-G---VAPDALALAHASRAAAITVSRRGTLSAFPGSRELAALLT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IKH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -132623 for 2355 contacts (-56.3/contact) +
2D Compatibility (PS) -31536 + (NN) -23115 + (LL) 204
1D Compatibility (HY) -8800 + (ID) 3750
Total energy: -199620.0 ( -84.76 by residue)
QMean score : 0.527
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