Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGIVGVGIDLVSIPDFAEQVDQPGTVFA-ETFTPGERRDASDKSSSAARHLAARWAAKEAVIKAWSGSRFAQRPVLPEDIHRDIEVVTDMWGRPRVRLTGAIAE---YLADVTIHVSLTHEGDTAAAVAILEAP
2WDS Chain:A ((22-143))
-SIIGVGIDVAEVERFGAALERT-PALAGRLFLESELLLPGGE-RRGVASLAARFAAKEALAKALGAPAG--------LLWTDAEVWVEAGGRPRLRVTGTVAARAAELGVASWHVSLSADAGIASAVVIAEG-
General information:
TITO was launched using:
RESULT:
Template:
2WDS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -49720 for 854 contacts (-58.2/contact) +
2D Compatibility (PS) -13382 + (NN) -8154 + (LL) 424
1D Compatibility (HY) -6400 + (ID) 2100
Total energy: -79332.0 ( -92.89 by residue)
QMean score : 0.516
(partial model without unconserved sides chains):
PDB file :
Tito_2WDS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2WDS-query.scw
PDB file :
Tito_Scwrl_2WDS.pdb
: