Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDIGAPVTVQVAVDPPYPVVIGTGLLDELEDLLADRHKVAVVHQPGLAETAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPELIRRAITVKAEVVAADEKESELREILNYGHTLGHAIERRERYRWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDPDALPQLLEIMAGDKKTRAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYAGVCAP |
| 1UJN Chain:A ((1-347)) | ------MQRLEVREPVPYPILVGEGVLKEVPPL---AGPAALLFDRRVEGFAQEVAKALGVR----HLLGLPGGEAAKSLEVYGKVLSWLAEKGLPRNATLLVVGGGTLTDLGGFVAATYLRGVAYLAFPTTTLAIVDASVGGKTGINLPEGKNLVGAFHFPQGVYAELRALKTLPLPTFKEGLVEAFKHGLIAGDEALLKVED-----LTPQSPRLEAFLARAVAVKVRVTEEDPLEKGKRRLLNLGHTLGHALEAQTRHALPHGMAVAYGLLYAALLGRALGGED--LLPPVRRLLLWLSPP-PLPPLAFEDLLPYLSLHWVVPLAPGRLVVRPL---PEGLLREAFAAWREELKGLGLL |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UJN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -220369 for 2921 contacts (-75.4/contact) +
2D Compatibility (PS) -36018 + (NN) -8159 + (LL) 1528
1D Compatibility (HY) -26000 + (ID) 6300
Total energy: -295318.0 ( -101.10 by residue)
QMean score : 0.513
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