Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSTTLAIVRLDPGLPLPSRAHDGDAGVDLYSAEDVELAPGRRALVRTGVAVAVPFGMVGLVHPRSGLATRVGLSIVNSPGTIDAGYRGEIKVALIN-------------LDPAAPI------------VVHRGDRIAQLLVQRVELVELVEVSSFDEAGLASTSRGDGGHGSSGGHASL
4WRK Chain:C ((3-155))
--NTLQVRLLSENARMPERNHKTDAGYDIFSAETVVLEPQEKAVIKTDVAVSIPEGYVGLLTSRSGVSSKTHLVI--ETGKIDAGYHGNLGINIKNNAIASNGYITPGVFDIKGEIDLSDAIRQYGTYQINEGDKLAQLVIVPIWTPELKQVEEFE----S------------------
General information:
TITO was launched using:
RESULT:
Template:
4WRK.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -84939 for 843 contacts (-100.8/contact) +
2D Compatibility (PS) -14011 + (NN) -6592 + (LL) -144
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -119386.0 ( -141.62 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_4WRK.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4WRK-query.scw
PDB file :
Tito_Scwrl_4WRK.pdb
: