Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDLITVKKLGSRIGAQIDGVRLGGDLDPAAVNEIRAALLAHKVVFFRGQHQLDDAEQLAFAGLLGTPIGHPAAIALADDAPIITPINSEFGKANR---WHTDVTFAANYPAASVLRAVSLPSYGGSTLWANTAAAYAELPEPLKCLTENLWALHTNRYDYVTTKPL-----TAAQRAFRQVFEKPDFRTEHPVVRVHPETGERTLLAGD-FVRSFVGLDSHESRVLFEVLQRRITMPENTIRWNWAPGDVAIWDNRATQHRAIDDYDDQHRLMHRVTLMGDVPVDVYGQASRVISGAPMEIAG |
| 3V17 Chain:B ((3-276)) | ----LTITPLSPALGAQISGVDISRDISAEERDAIEQALLQHQVLFLRDQ-PINPEQQARFAARFGDLHIHPIYPNVPD-TPQVLVLDTAVTDVRDNAVWHTDVTFLPTPALGAVLSAKQLPAYGGDTLWASGIAAFEALSAPLREMLDGLTATH----DFTKSFPLERFGTTPQDLARWEATRRNNPPLSHPVVRTHPVSGRKALFVNEGFTTRINELSELESDALLRLLFAHATRPEFSIRWRWQENDVAFWDNRVTQHFAVDDYRPNRRVMHRATILGDAP-------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3V17.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -105485 for 2130 contacts (-49.5/contact) +
2D Compatibility (PS) -28675 + (NN) -14694 + (LL) 1744
1D Compatibility (HY) -14800 + (ID) 5100
Total energy: -167010.0 ( -78.41 by residue)
QMean score : 0.436
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