Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MGLSIGIVGATGQVGQVMRTLLDERDFPASAVRFFASARSQGRKL-AFRGQEIEVEDAETADPSGLDIALFSAGSAMSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVV-SEVNFERDAHRRPKGIIANPNCTTMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGALEFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKILGIPDLLVSGTCVRVPVFTGHSLSINAEFAQPLSPERARELLDGATGVQLVD---VPTPLAAA-GVDESLVGRIRRDPGVPDGRGLALFVSGDNLRKGAALNTIQIAELLTADL- |
2HJS Chain:A ((5-338)) | QPLNVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAG-QRMGFAESSLRVGDVDSFDFSSVGLAFFAAAAEVSRAHAERARAAGCSVIDLSGALE--PSVAPPVMVSVNAERLASQAAPFLLSSPCAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARP-----------LEPRLFDRQIAFNLLAQVGAVDAEGH--SAIERRIFAEVQALLGERIGPLNVTCIQAPVFFGDSLSVTLQCAEPVDLAAVTRVLDATKGIEWVGEGDYPTVVGDALGQDETYVGRVRAGQADP--CQVNLWIVSDNVRKGAALNAVLLGELLIKHYL |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HJS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -121081 for 2816 contacts (-43.0/contact) +
2D Compatibility (PS) -35669 + (NN) -17658 + (LL) 488
1D Compatibility (HY) -22800 + (ID) 5550
Total energy: -202270.0 ( -71.83 by residue)
QMean score : 0.423
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