Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------MPVLALRLTALAALVISVSGCVMEAYGSRARSDAQSWIGLPIQDVIKRFGEPER-VTGDAARQKYVWKEY--ENYSHDYDYTYYEQGHGNTPNSSVLNQKTGTANQSGY-YTCIYEFFADAS-----GRVVDATARGECR
3ZC4 Chain:A ((8-164))
PVAETISKRFWTLIKMLRFYVVLRRFGYIDPLIYSIDPKQIKDVLSEALREFVSYTSSSSSRSIVIYDDPKNPVTAQAPCLVVAKRDEIPQNFPSIYRYTIYKIDKSSEYCISPLVVNDKYATLITPNESVIKEFFDKLDSNIQYARVLASLAVGGE-
General information:
TITO was launched using:
RESULT:
Template:
3ZC4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5433 for 851 contacts (-6.4/contact) +
2D Compatibility (PS) -12736 + (NN) 5605 + (LL) 100
1D Compatibility (HY) -5200 + (ID) 1400
Total energy: -19064.0 ( -22.40 by residue)
QMean score : -0.022
(partial model without unconserved sides chains):
PDB file :
Tito_3ZC4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ZC4-query.scw
PDB file :
Tito_Scwrl_3ZC4.pdb
: