Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQRRQQSGFTLIEIMVVVVILGILAALVVPQVMSRPDQAKVTVAKGDIKAIAAALDMYKLDNFAYPSTQQGLEALVKKPTGNPQPKNWNKDGYLKKLPVDPWGNPYQYLAPGTKGPFDLYSLGADGKEGGSDNDADIGNWDN
1T92 Chain:A ((3-106))
----------------------------------NKEKADRQKVVSDLVALEGALDMYKLDNSRYPTTEQGLQALVSAPSAEPHARNYPEGGYIRRLPQDPWGSDYQLLSPGQHGQVDIFSLGPDGVPE---SNDDIGNWT-
General information:
TITO was launched using:
RESULT:
Template:
1T92.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -7819 for 710 contacts (-11.0/contact) +
2D Compatibility (PS) -11560 + (NN) -11975 + (LL) 3848
1D Compatibility (HY) -8000 + (ID) 2450
Total energy: -37956.0 ( -53.46 by residue)
QMean score : 0.569
(partial model without unconserved sides chains):
PDB file :
Tito_1T92.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T92-query.scw
PDB file :
Tito_Scwrl_1T92.pdb
: