Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MMDINEIREYLPHRYPFLLVDRVVELDIEGKRIRAYKNVSINEPFFNGHFPEHPIMPGVLIIEAMAQAAGILGFKML---DVKPADGTLYYFVGSDKLRFRQPVLPGDQLQLHAKFISVKRSIWKFDCHATVDDKPVCSAEI--ICAERKL
3DOZ Chain:D ((14-157))
---IEHILQILPHRYPMLLVDRITELQ-ANQKIVAYKNITFNEDVFNGHFPNKPIFPGVLIVEGMAQSGGFLAFTSLWGFDPEIAKTKIVYFMTIDKVKFRIPVTPGDRLEYHLEVLKHKGMIWQVGGTAQVDGKVVAEAELKAMIAE---
General information:
TITO was launched using:
RESULT:
Template:
3DOZ.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113445 for 1031 contacts (-110.0/contact) +
2D Compatibility (PS) -14907 + (NN) -5427 + (LL) 884
1D Compatibility (HY) -16800 + (ID) 3500
Total energy: -153195.0 ( -148.59 by residue)
QMean score : 0.539
(partial model without unconserved sides chains):
PDB file :
Tito_3DOZ.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3DOZ-query.scw
PDB file :
Tito_Scwrl_3DOZ.pdb
: