Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSRVAPRDSAAQAASAVAESVRYQGRKASRQGSEQRRQAILDAAMRLIVRDGVRAVRHRAVAAEAQVPLSATTYYFKDIDDLITDTFALFVERNAEALSAFWSSVEGDLQEMAAVLADDPGARGSLVERIVELAVQYVQVQLTERREHLLAEQAFRQEALLNPRLRELADAHQRILSLGAVHFFQVLGSGQPEQDAKVLTSIILQMEYQGLVDGVEQLAVDEMRAILRRYLNLVMGL
3V6G Chain:A ((14-185))
----------------------------------GRRQAIVEAAERVIARQGLGGLSHRRVAAEANVPVGSTTYYFNDLDALREAALAHAANASADLLAQWRSDLD-----------KDRDLAATLARLTTVYLAD---------QDRYRTLNELYMAAAHRPELQRLARLWPDGLLALLEPRI-------GRRAANAVTVFFDGATLHALITG-TPLSTDELTDAIARLVADG---
General information:
TITO was launched using:
RESULT:
Template:
3V6G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -91257 for 1281 contacts (-71.2/contact) +
2D Compatibility (PS) -18774 + (NN) -10259 + (LL) 5380
1D Compatibility (HY) -4800 + (ID) 2400
Total energy: -122110.0 ( -95.32 by residue)
QMean score : 0.542
(partial model without unconserved sides chains):
PDB file :
Tito_3V6G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V6G-query.scw
PDB file :
Tito_Scwrl_3V6G.pdb
: