Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKHAISTVVPSRPVRLPSGDQPAEPGNA
3M4G Chain:F ((2-72))
-SKGHSLQDPYLNTLRKERVPVSIYLVNGIKLQGQIESFDQFVILLKNTVSQMVYKAAISTVVPSRPVRLPS----------
General information:
TITO was launched using:
RESULT:
Template:
3M4G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44026 for 424 contacts (-103.8/contact) +
2D Compatibility (PS) -7840 + (NN) -2102 + (LL) -60
1D Compatibility (HY) -11200 + (ID) 3500
Total energy: -68728.0 ( -162.09 by residue)
QMean score : 0.504
(partial model without unconserved sides chains):
PDB file :
Tito_3M4G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3M4G-query.scw
PDB file :
Tito_Scwrl_3M4G.pdb
: