Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRTLHVDLGERSYPIYIGENLLGDARWFAPHIVGRRVAVISNETVAPLYLETLLKALQ--GHEVTPVVLPDGEAYKQWETLQLIFDVLLKERHDRKTTLIALGGGVIGDMAGFAAACYQRGVNFIQVPTTLLSQVDSSVGGKTGINHPLGKNMIGAFYQPQAVVIDTASLKTLPSRELSAGLAEVIKYGFICDEPFITWLEAHMDALLA-LEPTVVTEAIERSCAAKARVVGADERESGVRATLNLGHTFGHAIETQQGYGVWLHGEAVGAGTVMALEMSHRLGWLSAAERDRGIRLLRRAGLPVVPPAEMTAEDFMEHMAVDKKVLDGRLRLVLLQGLGNAVVTGDFPREILDATLRTDYRALADQLGDE |
| 3QBE Chain:A ((19-366)) | -------AVDPPYPVVIGTGLLDELEDLLA--DRHKVAVVHQPGLAE-TAEEIRKRLAGKGVDAHRIEIPDAEAGKDLPVVGFIWEVLGRIGIGRKDALVSLGGGAATDVAGFAAATWLRGVSIVHLPTTLLGMVDAAVGGKTGINTDAGKNLVGAFHQPLAVLVDLATLQTLPRDEMICGMAEVVKAGFIADPVILDLIEADPQAALDPAGDVLPEL-IRRAITVKAEVVAA----SELREILNYGHTLGHAIERRERY-RWRHGAAVSVGLVFAAELARLAGRLDDATAQRHRTILSSLGLPVSYDP-DALPQLLEIMAGDKKTRAGVLRFVVLDGLAKPGRMVGPDPGLLVTAYA-GVC--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3QBE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -231512 for 3020 contacts (-76.7/contact) +
2D Compatibility (PS) -36486 + (NN) -13492 + (LL) 2020
1D Compatibility (HY) -22000 + (ID) 6800
Total energy: -308270.0 ( -102.08 by residue)
QMean score : 0.481
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