Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNYIKVHQPLNVDLRTQKTQTKLYTVLERFYLEGRTFESISIKDLCEQAQISRATFYRHHEEIIQIIEVQILRTMQYFSLEFDQIIL-----TKENIQRLILRSIQKNPLLFQAIFWSRAE------NIFLDVV----SGEILRISLLKEISFSDSNFIPNCFARMILSLAAEIQQSNKDYTNGQLVELIQEAARFLQK
2QIB Chain:A ((9-189))
--------------MGVEERRQQLIGVALDLFS-RRSPDEVSIDEIASAAGISRPLVYHYFPGKLSLYEAALQRASDDLADRFVEPRQGPLGARLLRVMGRYFDFVDEHGPGFSALMRGGPAVGSTTTNALVDSVRQAAYVQILSHLDV-TEPPARLELVVRSWISLAESTALLWLDG-RRIPRAELETQLVHDFAAL--
General information:
TITO was launched using:
RESULT:
Template:
2QIB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -106107 for 1120 contacts (-94.7/contact) +
2D Compatibility (PS) -17621 + (NN) -5986 + (LL) 1108
1D Compatibility (HY) -4000 + (ID) 1200
Total energy: -133806.0 ( -119.47 by residue)
QMean score : 0.466
(partial model without unconserved sides chains):
PDB file :
Tito_2QIB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QIB-query.scw
PDB file :
Tito_Scwrl_2QIB.pdb
: