Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MKIGIDKIGFYTPAFYVDMVELAEARNIDPNKFTIGIGQDKMAFAPITQDSVTMGANAALQILDEEDL--KKIDLVILATESGIDESKAGAVYIHRLLGIQPFSRA--IEIKEACYGATAGINLAKDYVA--KHPDSKVLVIGSDIARYGLATGGEATQGAGAVAMVIAADPRCITLEDDNVFYTEDIMDFWRP-VYSEYACVEGKYSTEQYIHFFQTIWEKYSAKFGKN------LEDFAAICFHLPYTKMGKKAL-------------------------------------DTIIETAPSDVQEKLLENYRLSTLYSRNVGNIYTGSLYLSFISLLDNQPDLQAEDKIGFFSYGSGAVGEFFHGVLQPDY-----KKYIRKDEHAELLANRTKLAIPDYETKFKQQLPKDGSIFEVDPASDPAA------IVLTGIQE-HKRQYIKK |
| 2F82 Chain:A ((2-451)) | AKNVGILAMDIYFPPTCVQQEALEAHDGASKGKYTIGLGQDCLAFCTELEDVISMSFNAVTSLLEKYKIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAVY-AEGPARPTGGAAAIAMLIGPDAPIVFESKLRGSHMAHVYDFYKPNLASEYPVVDGKLSQTCYLMALDSCYKHLCNKFEKLEGKEFSINDADYFVFHSPYNKLVQKSFARLLYNDFLRNASSIDEAAKEKFTPYSSLSLDESYQSRDLEKVSQQLAKTYYDAKVQPTTLVPKQVGNMYTASLYAAFASLVHNKHSDLAGKRVVMFSYGSGSTATMFSLRLCENQSPFSLSNIASVMDVGGKLKARHEYAPEKFVETMKLMEHRYGAKEFVTSKEGILDLLAPGTYYLKEVDSLYRRFYGKK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2F82.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181549 for 3399 contacts (-53.4/contact) +
2D Compatibility (PS) -41113 + (NN) -9168 + (LL) -172
1D Compatibility (HY) -21600 + (ID) 5200
Total energy: -258802.0 ( -76.14 by residue)
QMean score : 0.417
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