Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSLKMKWIIAISIIIVLLVVGWFLGTRLTVKKYEVSSTKIEKEIKLVQLSDLHFSEFGDKNEKLLHKVENL-NPDVIAITGDLFDRQGDSVPKELIKKLTKIAPVYFSPGNHEYDVKNAYEDDYKPFLEKMGVVNLEDKT---------ATIDVGGQKFQMSGLRSSA-NLDYDYSYYKKGLAEIQTQQDSQYYQVLL----SHMPDYFKLYVENDFDLTLSGHTH----------GGIVRIPYTNIGAIAPGPQRTILPEYVYGEHSKN--GKTMIISAGLGAGSLHQKAFPRLGNPYEIVAVTIKPELK----------- |
| 1T71 Chain:A ((1-281)) | ---------------------------------------MMNSIKFIFLGDVYGKAGRNIIKNNLAQLKSKYQADLVIVNAENTTH-GKGLSLKHYEFLKEAGVNYITMGNHTWF-QKLDLAVVINKKDLVRPLNLDTSFAFHNLGQGSLVFEFNKAKIRITNLLGTSVPLPFKTTNPFKVLKELILKRDCDLHIVDFHAETTSEKNAFCMAFDGYVTTIFGTHTHVPSADLRITPKGSAYITDVGMCGPGFGSVIGANPEQSIRLFCAGSREHFEVSKCGAQLNGVFFEVDVNTKKVIKTEAIRIVEDDPRYLKQDYFNLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1T71.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62552 for 2022 contacts (-30.9/contact) +
2D Compatibility (PS) -26133 + (NN) -10735 + (LL) 4696
1D Compatibility (HY) -3200 + (ID) 1700
Total energy: -99624.0 ( -49.27 by residue)
QMean score : 0.285
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