Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------------------------------------MKLIGIVGTNSNKSTNRQLLQYMQQHFAD-KAEIELIEVKDLPLFNKPADKNVPQVILDIAAKIEEADGVIIGTPEYDHSIPSALMSVLAWLS---YGIYPLLNKPVMITGASYGTLGSSRAQLQLRQILNAPELKASVLPDEFLLSHSLQAFDKDGNLHDIETSQKLDAIFDDFRLFVKITGKLSNARDLLQKEAENFDWESL
2FZV Chain:A ((23-257))
NAMRLRHLSDPDSLPALDKSFAIERPALGLAPDAPPVRILLLYGSLRARSFSRLAVEEAARLLQFFGAETRIFDPSDLPLPDQVQSDD-HPAVKELRALSEWSEGQVWCSPERHGQITSVMKAQIDHLPLEMAGIRPTQGRTLAVMQVSGGS-QSFNAVNTLRLLGRW--MRMFTIPNQSSIAKAFQEFDAAGRMKPSPYYDRIADVMEELVRFTALVRPHREALTDRYSERKAAG-HVI
General information:
TITO was launched using:
RESULT:
Template:
2FZV.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111482 for 1557 contacts (-71.6/contact) +
2D Compatibility (PS) -21710 + (NN) -12329 + (LL) 488
1D Compatibility (HY) -2000 + (ID) 1700
Total energy: -148733.0 ( -95.53 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2FZV.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FZV-query.scw
PDB file :
Tito_Scwrl_2FZV.pdb
: