Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEELFCIGCGARIQTENKDAAGYTPRAALEKGLETGELYCQRCFRLRHYNEITDVHITDDEFLKLLHEVGDSDALVVNVIDIFDFNGSII--PGLSRFV--AGNDVLLVGNKKDILPKSVKDGKVTQWLTERAHEEGLRPVDVILTSAQNHHAIKDLIDTIEKYRHGRDVYVVGVTNVGKSTLINAIIREITGSRDVITTSRFPGTTLDKIEIPLDDGSYIFDTPGIIHRHQMAHYLTAKNLKYVSPKKEIKPKTYQLNSEQTLFLAGLARFDFISGQKQGFTAYFDNNLNLHRTKLVGADEFYTKHVGKLLTPPTGKEVSDFPKLVRHEFTIKNKMDIVYSGLGWIRVKSEAENPVVVAAWAPEGVAVVLRKALI |
| 2RCN Chain:A ((128-282)) | ---------------------------------------------------------------------AANIDQIV-IVSAILPELSLNIIDRYLVGCETLQVEPLIVLNKIDLLDDEG-MDFVNEQMDIY-RNI---GYRVLMVSSHTQDGLKPLEEALT----GRISIFAGQSGVGKSSLLNALLGLQNEI-LTN---------TAARLYHFPHGGDVIDSPGVREFGLWHLEPEQITQGFVEFHDYLGHCKYRDCKHDADPGCAIREAVENGAIAETRFENYHRILESMA---------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2RCN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -69968 for 1002 contacts (-69.8/contact) +
2D Compatibility (PS) -14909 + (NN) -2343 + (LL) 11600
1D Compatibility (HY) -6000 + (ID) 1350
Total energy: -82970.0 ( -82.80 by residue)
QMean score : 0.400
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