Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKILFFGEPL-IRITPKEND-YFADSIST-KLFYGGSEVNTARALQGFGQDTKLLSALPNNPIGNSFLQFLKAQGIDTHSIQWVGERVGLYFLE-DSFACRKGEVVYDRDHSSLHDFRINQIDFDQLFEGVSL-FHFSGITLSLDESIQEITLLLLKEAKKREITISLDLNFRSKLISPKNAK---ILFSQFATFADICFGIEPLMVDSQDTTFFNRDEATIEDVKERMISLI-NHFDFQVIFHTKRLQDEWGRNHYQAYIANRKQEFVTSKEITTAVNQRIGSGDAFVAGALYQLLQHSDSKTVIDFAVASASLKCALEGDNMFETVTAVNKVLNQSKDIIR---- |
| 3KTN Chain:A ((2-341)) | SLKIAAFGE-VMLRFTPPEYLMLEQTEQLRMN--FVGTGVNLLANLAHFQLETALITKLPANRLGEAGKAALRKLGISDQWVGEKGDHIGSFFAEMGYGIRPTQVTYQNRHQSAFGISEAKDYDFEAFLAE-VDMVHICGISLSLTEKTRDAALILAQKAHAYQKKVCFDFNYRPSLNTANSALFMRQQYERILPYCDIVFGSRRDLVELLGFI--PREDLEGEAQETELIQRFMSQYNLEWFAGTTRSHSQ-NQNYLSGYLYTQNE-YQQSEKRPLLNLDRIGAGDAYAAGILYGYSQNWSLEKAVTFATVNGVLAHTIQGDIPLTTVKQVNHVLEHPNIDLIREGH |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KTN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -148295 for 2727 contacts (-54.4/contact) +
2D Compatibility (PS) -35107 + (NN) -12808 + (LL) 884
1D Compatibility (HY) -12000 + (ID) 4050
Total energy: -211376.0 ( -77.51 by residue)
QMean score : 0.454
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