Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPKNELNNKLNKLKHVQVYNKIFNMIQDGTYSPGMQLPSEPELAGQLNVSRATLRKSLALLQEDHLVKNIRGKGNFIRENSSNLSENGYENRQHPIKTCLTSKITEVELEFRVEVPAEAITASLKQETPVVVIADRWYHTDDGPLAYTLSFIPIELISDAEISLHDTKQLLNFIEEGIYQEGISSHSQSHLGYATSGNFSATKYTLSDHGQFILIQETIFKQEKILMCNKHYVPIEHFELSITSH--- |
| 3F8M Chain:A ((14-243)) | -------------LKHQVVRAELDRMLDG-MRIGDPFPAEREIAEQFEVARETVRQALRELLIDGRVERR-GRTTVVARPKIRQP-LGMGSYTEAAKAQGLSAGRILVAWSDLTADEVLAGVLGVDVGAPVLQLERVLTTDGVRVGLETTKLPAQRYPGLRETFDHEASLYAEIRS--RGIAFTRTVDTIDTALPDAREAALLGADARTPMFLLNRVSYDQDDVAIEQRRSLYRGDRMTFTAVMHAKN |
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General information:
TITO was launched using:
| RESULT:
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Template: 3F8M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -52776 for 1665 contacts (-31.7/contact) +
2D Compatibility (PS) -24653 + (NN) -4392 + (LL) 860
1D Compatibility (HY) -800 + (ID) 1650
Total energy: -83411.0 ( -50.10 by residue)
QMean score : 0.385
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