Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTKLVNEMILVLDFGSQYNQLITRRIREFGVYSELHPHTLTAEEIKKMNPKGIILSGGPNSVYDENSFRCDEKIFELDIPVLGICYGMQLMTHYLGGKVEAASQREYGKANIRIEGTPDLFRDLPNEQVVWMSHGDLVVEVPEGFTVDATSHHCPNSAMSKADKKWYGVQFHPEVRHSEYGNDLLKNFVFGVCECEGEWSMENFIEIEMQKIRETVGDKQVLCALSGGVDSSVVAVLIHKAIG-DQLTCIFVDHGLLRKGEAEGVMKTFSEGFNMNVIKVDAKDRFLNK----------LKGVSDPEQKRKIIGNEFIYVFDDEADKLK---GIDYLAQGTLYTDIIESGT----ATAQTIKSHHNVGGLPEDMQ--FELIEPLNTLFKDEVRALGTELGIPDEIVWRQPFPGPGLGIRVLGEVTEEKL----------E--------------IVRESDAILREEIANHGLE--RDIWQYFTV-LPDIRSVGVMGDARTYDYTIGI---------------------------------------------------------------------------------------------------------RAVTSIDGMTSDWA----RIPWDVLEVISTRIVNEVKHINRVVYDITSKPPATIEWE
2VXO Chain:A ((29-697))-----EGAVVILDAG--YGKVIDRRVRELFVQSEIFPLETPAFAIKEQGFRAIIISGGP-------APWFDPAIFTIGKPVLGICYGMQMMNKVFGGTVHK-------VFNISVDNTCSLFRGLQKEEVVLLTHGDSVDKVADGFKVVARSGN-IVAGIANESKKLYGAQFHPEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVLVLLSGGVDSTVCTALLNRALNQEQVIAVHIDNGFMRKRESQSVEEAL-KKLGIQVKVINAAHSFYNGTTTLPRISKTLNMTTSPEEKRKIIGDTFVKIANEVIGEMNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDEVRILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYICKDFPETNNILKIVADFSASVKKPHTLLQRVKACTTEEDQE-KLMQITSLHSLNAFLLPI-KTVGVQGDCRSYSYVCGISSKDEPDWESLIFLARLIPRMCHNVNRVVYIFGPPVKEPPTDVTPTFLTTGVLSTLRQADFEAHNILRESGYAGKISQMPVILTPLHFDRDPLQKQPSCQRSVVIRTFITSDFMTGIPATPGNEIPVEVVLKMVTEI-KKIPGISRIMYDLTSKPPGTTEWE


General information:
TITO was launched using:
RESULT:

Template: 2VXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2309 -252544 -109.37 -518.57
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain A : 0.73

3D Compatibility (PKB) : -109.37
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.73
QMean score : 0.440

(partial model without unconserved sides chains):
PDB file : Tito_2VXO.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2VXO-query.scw
PDB file : Tito_Scwrl_2VXO.pdb: