Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTPYEDLLRFVLETGTPKSDRTGTGTRSLFGQQMRYDLSAGFPLLTTKKVHFKSVAYELLWFLRGDSNIGWLHEHGVTIWDEWASD------------TGELGPIYGVQWRSWP--A------------------------PSG--------EHIDQISAALDLLRTDPDSRRIIVSAWNVGEIERMALPPCHAFFQF--YVADGRLSCQLYQRSADLFLGVPFNIASYALLTHMMAAQAGLSVGEFIWTGGDCHIYDNHVEQVRLQLSREPRPYPKLLLADR-DSIFEY--------TY---EDIVVKNYDPHPAIKAPVAV |
| 3V8H Chain:A ((5-318)) | MKQYLDLVRTILDTGTWQSN--GIRTIGIPGAMLRFDLQQGFPAVTTKKLAFKSAIGELVGFLRATRSAAEFRALGCKVWDANANENAQWLANPYRRGADDLGDVYGVQWRRWPGYKVLDAHADAQIADATSRGFRIVARFEEGGADKVLLHKAIDQLRDCLDTIVRDPSSRRILFHGWNPAVLDEIALPACHLLYQFLPNVERREISLCLYIRSNDVGLGTPFNLAEGAALLTLVGRLTGYSPRWFTYFIGDAHIYENQLDMLKQQLEREPFESPRLELAERVPDYAKTGKYEPQWLERVEPSDFTLVGYRHH--------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3V8H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -175945 for 1940 contacts (-90.7/contact) +
2D Compatibility (PS) -26809 + (NN) -10843 + (LL) 956
1D Compatibility (HY) -17200 + (ID) 5150
Total energy: -234991.0 ( -121.13 by residue)
QMean score : 0.533
|
|
|