Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLILLTGLVLILNLQLGSAYQLTCYFTNWAQYRPGLGRFMPDNIDPCLCTHLIYAFAGRQN-NEITTIE-WNDV-----------------TLYQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLDFDWEYPGSRGSPPQDKHLFTVLVQEMREAFEQEAKQI-NKPRLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKNGATQGWDAPQEVPYAYQ--GNVWVGYDNIKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPIEPITAAPSGSGNGSGSSSSGGSSGGSGFCAVRANGLYPVANNRNAFWHCVNGVTYQQNCQAGLVFDTSCDCCNWA |
| 3G6M Chain:A ((19-383)) | -------------------TGSINAVYFTNWGIYG---RNFQPADLQASKILHVLYSFMNLRVDGTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTW-STNFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYPAS----ETDANNMVLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYN-VLKLAQLGSVLDNINLMAYDYAGSWDSVSGHQTNLYPSTSNPS-STPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGT----DGPGKPYSTIGE-GS--WESGIWDYKVLPK---AGATVITDSAAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKT-------GSDSLIGTALSSMGS--------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3G6M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -207492 for 3079 contacts (-67.4/contact) +
2D Compatibility (PS) -36925 + (NN) -18276 + (LL) 3884
1D Compatibility (HY) -20400 + (ID) 5250
Total energy: -284459.0 ( -92.39 by residue)
QMean score : 0.297
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