Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MCWTMPSPFTGSSTRNMESGNQSTVTEFIFTGF-PQLQDGSLLYF--------FPLLFIYTFIIIDNLLIFSAVRLDTHLHN-----------PMYNFISIF--SFLEIWYTTATIPKMLSNLISEKKAISMTGCIL--QMYFFHSLENSEGILLTTMAIDRYVA---ICNPLRYQMI-------MTPRLCAQLSAGSCLFGFLILL-----PEIVMISTLPFCGPNQIHQIFCDLVPVLSLACTDTSMILIEDVIHAV---TIIITFLIIAL----SYVRIVTVILRIPSSEGRQKAFSTCAGHLMVFPIFFGS---VSLMYLRFSDTYPPVLDTAIALMFTVLAPFFNPIIYSLRNKDMNN------AIKKLFCLQKVLNKPGG- |
| 1A6Q Chain:A ((2-368)) | --GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHGA--DRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEP------------EVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVDTCLYKGSRD-------NMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKGV-PDLVHVMRTLASENIPSLPPGGELASKRNVIEAVYNRLNPY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1A6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -325583 for 2531 contacts (-128.6/contact) +
2D Compatibility (PS) -31736 + (NN) 1300 + (LL) 1588
1D Compatibility (HY) -8400 + (ID) 2550
Total energy: -365381.0 ( -144.36 by residue)
QMean score : 0.145
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