Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGLGASLHVWGWLMLGSCLLARAQLDSDGTITIEEQIVLVLKAKVQCELNITAQLQEGEGNCFPEWDGLICWPRG---TVGKISAVPCPPYIYDFNHKGVAFRHCNPNGTWDFMHSLNKTWANYSDCLRFLQPDISIGKQEFFERLYVMYTVGYSISFGSLAVAILIIGYFRRLHCTRNYIHMHLFVSFMLRATSIFVKDRVVHAHIGVKELESLIMQDDPQNSIEATSVDKSQYIGCKIAVVMFIYFLATNYYWILVEGLYLHNLIFVAFFSDTKYLWGFILIGWGFPAAFVAAWAVARATLA--DARCWELSAGDIKWIYQAPILAAIGLNFILFLNTVRVLATKIWETNAVGHDTRKQYRKLAKSTLVLVLVFGVHYIVFVCLPHSFTGLGWEIRMHCELFFNSFQGFF-VSIIYCYCNGEVQAEVKKMWSRWNLSVDWKRTPPCGSRRCGSVLTTVTHSTSSQSQVAASTRMVLISGKAAKIASRQPDSHITLPGYVWSNSEQDCLPHSFHEETKEDSGRQGDDILMEKPSRPMESNPDTEGCQGETEDVL |
| 4CVH Chain:A ((1-411)) | ------SMHPQA---VAAVLPAGPTPKQFCPILERPLISYTLQALER-----------------------VCWIKDIVVAVTGENMEVMKSIIQKYQHKRISLVEAGVTRHRSIFNGLKALAED--------QINSKLSKPE-----------------------VVII-----HDAVRPFVEEGVLLKVVTAAKEH-------GAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFL-------------------FDVIYEAYQQCSDYDLEF----GTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERIS-------QEICVVMDTEEDNKHVGHLLEEVLKSELNHVKVTSEALDQCY-NFVCVNVTTSDFQETQKLLSMLEESSLCILYPVVVVSVHFL------------------DFKLVPP----------------------SQKMENLMQIREFAKEVKER----NILLYGLLISYPQD--------DQKLQESLRQGAIIIASLIKE------RNSGLIGQLLIA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -292732 for 3081 contacts (-95.0/contact) +
2D Compatibility (PS) -40598 + (NN) -8264 + (LL) 12136
1D Compatibility (HY) -13200 + (ID) 3200
Total energy: -345858.0 ( -112.26 by residue)
QMean score : 0.233
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