Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKPITPSTYVRCLNVGLIRKLSDFIDPQEGWKKLAVAIKKPSGDDRYNQFHIRRFEALLQTGKSPTSELLFDWGTTNCTVGDLVDLLIQNEFFAPASLLLPDAVPKTANTLPSKEAITVQQKQMPFCDKDRTLMTPVQNLEQSYMPPDSSSPENKSLEVSDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSRIVGTTAYMAPEALR-GEITPKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDIKEEIEDEEKTIEDYIDKKMNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS |
2OFV Chain:B ((25-272)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RLGAGQFGEVWMGYYNGHTKVAVKSLKQ-----G-----AFLAEANLMKQLQHQRLVRLYAVVTQ-EPIYIITEYMENGSLVDFLKTPSGIK-LTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIED------------PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVT------HGRIPYP-------IQNLE-------GYRMVRPDNCP-EELYQLMRLCWKERPEDRPTFDYLRSVLEDF--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2OFV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90644 for 1790 contacts (-50.6/contact) +
2D Compatibility (PS) -23721 + (NN) -8699 + (LL) 13980
1D Compatibility (HY) -22400 + (ID) 4150
Total energy: -135634.0 ( -75.77 by residue)
QMean score : 0.358
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