Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSKNIKNILSITELLSGWL-LHDFANSMNGIMFGLEELEAGNQNDASTHREALLLLKESSDDLIYKHKV---MKQAYSSSADNRSFSQTKLNIE-NYLLKKK
1ARG Chain:A ((205-283))
----------------GWLPLFDFA--YQGFARGLEEDAEGLRAFAAMHKELIVASSYSKNFGLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPA
General information:
TITO was launched using:
RESULT:
Template:
1ARG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12030 for 370 contacts (32.5/contact) +
2D Compatibility (PS) -7509 + (NN) 2669 + (LL) 1280
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: 4620.0 ( 12.49 by residue)
QMean score : 0.065
(partial model without unconserved sides chains):
PDB file :
Tito_1ARG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1ARG-query.scw
PDB file :
Tito_Scwrl_1ARG.pdb
: