Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MGRIQRNKIKVEIKKLSHGKDLPLPCYATMQSAGMDLYAALGNSIVLNPLERLLIPTGIVIVIPNGFEGQIRPRSGLAAKYGITVLNSPGTIDSDYRGEVKVCLINLSNQPYEIKRGDRIAQILIAPVFRVIWDDAERLCT---EETERSAGGFGSSGR
3P48 Chain:B ((9-132))
--------LKIQLRSASA----TVPTKGSATAAGYDIYAS--QDITIPAMGQGMVSTDISFTVPVGTYGRIAPRSGLAVKNGIQ--TGAGVVDRDYTGEVKVVLFNHSQRDFAIKKGDRVAQLILEK----IVDDAQIVVVDSL---------------
General information:
TITO was launched using:
RESULT:
Template:
3P48.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -64106 for 846 contacts (-75.8/contact) +
2D Compatibility (PS) -13102 + (NN) -4433 + (LL) 1692
1D Compatibility (HY) -9600 + (ID) 2350
Total energy: -91899.0 ( -108.63 by residue)
QMean score : 0.399
(partial model without unconserved sides chains):
PDB file :
Tito_3P48.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3P48-query.scw
PDB file :
Tito_Scwrl_3P48.pdb
: