Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFAVRYKITIEYNGSSFSGWQKQQHSANSIQETIENAIFNFS-GEKVTLHCGGRTDAGVHALGQVAHFDMERKFELYKIRNAINYHLKSIPIVVLNAETVDNTFHSRFSAKKRYYEYRIINRYAPAALEAGYAWQVFNPLDVNIMREAAKYLLGKHNLLSFRSKDCQATNPIRTIDDIDIVQNGSHIYIKISAISFLHNQVRIIVGTLVEFGKSRTNPQKMLNILNQCKRNAAGVTAPPFGLYLAKIDY |
| 2A1F Chain:A ((1-239)) | LSQPIYKRILLKLSGEALQGEDGLGIDPAILDRMAVEIKELVEMGVEVSVVLGG----GNLFRGAKLAKAGMNRVVGDHMGMLATVMNGLAMRDSLFRADVNAKLMSAFQLNGICDTYN--WSEAIKMLREKR--------VVIFSAGTGNPFFTTDSTACLRGIEIEA-DVVLKATKVDGVYDCAKLYKNLSYAEVIDKELKVMDLSAFTLARDHGMPIRVFNMGKP-GALRQVVTGTEEGTTICEG-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2A1F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -37945 for 1922 contacts (-19.7/contact) +
2D Compatibility (PS) -23676 + (NN) 2544 + (LL) 1452
1D Compatibility (HY) -3200 + (ID) 1400
Total energy: -62225.0 ( -32.38 by residue)
QMean score : 0.125
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